High-throughput sequencing explores the genetic variability of endophytic bacteria in three Sichuan bamboo species (Phyllostachys edulis, Bambusa rigida, and Pleioblastus amarus)

Faculty Agriculture Year: 2025
Type of Publication: ZU Hosted Pages:
Authors:
Journal: Frontiers in Microbiology Frontiers Volume:
Keywords : High-throughput sequencing explores , genetic variability , endophytic    
Abstract:
This study investigated the diversity and composition of endophytic bacterial communities in the leaves of three bamboo species, Phyllostachys edulis, Bambusa rigida, and Pleioblastus amarus, using high-throughput sequencing. The results showed that bamboo species significantly influence the structure and diversity of endophytic bacterial communities. The dominant bacterial phyla were Proteobacteria, Actinobacteria, and Myxococcota. Among the studied species, Bambusa rigida exhibited the highest diversity and abundance of endophytic bacteria, followed by Pleioblastus amarus and Phyllostachys edulis. Functional prediction analysis revealed that endophytic bacteria were mainly involved in six biological pathways including metabolism, cellular processes, environmental information processing, genetic information processing, organic systems, and human disease related pathways. Overall, these findings improve our understanding of bamboo–microbe interactions and provide useful information for bamboo forest management and the development of beneficial microorganisms with potential ecological and environmental application
   
     
 
       

Author Related Publications

  • Ahmed Hosieny Abdou Mhamd, "Genome-Wide Identification and Expression Analysis of Metal Tolerance Protein Gene Family in Medicago truncatula Under a Broad Range of Heavy Metal Stress", Frontiers, 2021 More
  • Ahmed Hosieny Abdou Mhamd, "Nile Tilapia as bio indicator to estimate the contamination of water using SDS-PAGE and RAPA-PCR techniques", faculty of Agr. Ain Shams University, 2012 More
  • Ahmed Hosieny Abdou Mhamd, "Estimation of heat shock protein 70 (Hsp70) gene expression in Nile tilapia (Oreochromis niloticus) using Quantitative Real-time PCR", Zagazig Journal of Agriculture Research, 2017 More
  • Ahmed Hosieny Abdou Mhamd, "Comprehensive genome wide identification and expression analysis of MTP gene family in tomato (Solanum lycopersicum) under multiple heavy metal stress", ُELSEVIR, 2021 More
  • Ahmed Hosieny Abdou Mhamd, "Primary plant nutrients modulate the reactive oxygen species metabolism and mitigate the impact of cold stress in overseeded perennial ryegrass", frontiers, 2023 More

Department Related Publications

  • Ahmed Mansour Mohamed Mansour Elzohery, "Genes, Genomes and Genomics", Global Science Books, Ltd, 2010 More
  • Ahmed Mansour Mohamed Mansour Elzohery, "Bio-fertilizer and organic manure affects rice productivity in newly reclaimed saline soil.", Dynamic Soil, Dynamic Plant 2009, 2009 More
  • Ahmed Mansour Mohamed Mansour Elzohery, "From PCR to the Bioinformatics Era and Integrative Biology The Digitalization of Life", Global Science Books, Ltd, 2009 More
  • Ahmed Mansour Mohamed Mansour Elzohery, "Gene-Tracer: Algorithm Tracing Genes Modification from Ancestors through Offsprings", International Journal of Computer Applications (IJCA), 2012 More
  • Ahmed Hosieny Abdou Mhamd, "Nile Tilapia as bio indicator to estimate the contamination of water using SDS-PAGE and RAPA-PCR techniques", faculty of Agr. Ain Shams University, 2012 More
Tweet