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High-throughput sequencing explores the genetic variability of endophytic bacteria in three Sichuan bamboo species (Phyllostachys edulis, Bambusa rigida, and Pleioblastus amarus)
Faculty
Agriculture
Year:
2025
Type of Publication:
ZU Hosted
Pages:
Authors:
Ahmed Hosieny Abdou Mhamd
Staff Zu Site
Abstract In Staff Site
Journal:
Frontiers in Microbiology Frontiers
Volume:
Keywords :
High-throughput sequencing explores , genetic variability , endophytic
Abstract:
This study investigated the diversity and composition of endophytic bacterial communities in the leaves of three bamboo species, Phyllostachys edulis, Bambusa rigida, and Pleioblastus amarus, using high-throughput sequencing. The results showed that bamboo species significantly influence the structure and diversity of endophytic bacterial communities. The dominant bacterial phyla were Proteobacteria, Actinobacteria, and Myxococcota. Among the studied species, Bambusa rigida exhibited the highest diversity and abundance of endophytic bacteria, followed by Pleioblastus amarus and Phyllostachys edulis. Functional prediction analysis revealed that endophytic bacteria were mainly involved in six biological pathways including metabolism, cellular processes, environmental information processing, genetic information processing, organic systems, and human disease related pathways. Overall, these findings improve our understanding of bamboo–microbe interactions and provide useful information for bamboo forest management and the development of beneficial microorganisms with potential ecological and environmental application
Author Related Publications
Ahmed Hosieny Abdou Mhamd, "Genome-Wide Identification and Expression Analysis of Metal Tolerance Protein Gene Family in Medicago truncatula Under a Broad Range of Heavy Metal Stress", Frontiers, 2021
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Ahmed Hosieny Abdou Mhamd, "Nile Tilapia as bio indicator to estimate the contamination of water using SDS-PAGE and RAPA-PCR techniques", faculty of Agr. Ain Shams University, 2012
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Ahmed Hosieny Abdou Mhamd, "Estimation of heat shock protein 70 (Hsp70) gene expression in Nile tilapia (Oreochromis niloticus) using Quantitative Real-time PCR", Zagazig Journal of Agriculture Research, 2017
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Ahmed Hosieny Abdou Mhamd, "Comprehensive genome wide identification and expression analysis of MTP gene family in tomato (Solanum lycopersicum) under multiple heavy metal stress", ُELSEVIR, 2021
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Ahmed Hosieny Abdou Mhamd, "Primary plant nutrients modulate the reactive oxygen species metabolism and mitigate the impact of cold stress in overseeded perennial ryegrass", frontiers, 2023
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Department Related Publications
Ahmed Salaheldeen Mohamed Abdelrahman Eldomyaty, "IDENTIFICATION OF MOLECULAR MARKERS FOR SALT AND DROUGHT TOLERANCE USING BULKED SEGREGANT ANALYSIS (BSA) IN BREAD WHEAT (Triticum aestivum L.)", Zagazig Journal of Agricultural Research, 2014
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Abdallah Abdelaziem Hassanin Safan, "Purification and Modes of Antifungal Actionby Vicia faba cv. Egypt Trypsin Inhibitor", School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong, China., 2010
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Abdallah Abdelaziem Hassanin Safan, "Isolation of a New Trypsin Inhibitor from the Faba Bean (Vicia faba cv.Giza 843) with Potential Medicinal Applications", School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong, China., 2011
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Abdallah Abdelaziem Hassanin Safan, "Assessment of the R2R3 MYB gene expression profile during tomato fruit development using in silico analysis, quantitative and semi-quantitative RT-PCR", Elsevier, 2022
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Abdallah Abdelaziem Hassanin Safan, "Genetic and Morphological Diversity Assessment of Five Kalanchoe Genotypes by SCoT, ISSR and RAPD-PCR Markers", MDPI, 2022
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