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Mapping association of molecular markers and sheath blight (Rhizoctonia solani) disease resistance and identification of novel resistance sources and loci in rice
Faculty
Agriculture
Year:
2018
Type of Publication:
ZU Hosted
Pages:
Authors:
Khalid Fathi AbdulMuttalib Mohammed
Staff Zu Site
Abstract In Staff Site
Journal:
Euphytica Springer
Volume:
Keywords :
Mapping association , molecular markers , sheath blight
Abstract:
Sheath blight (ShB) disease caused by Rhizoctonia solani is one of the major threats to rice crop world-wide. Progress in breeding for resistant rice varieties is limited due to lack of highly resistant germplasm against sheath blight. In present study, diverse rice landrace were phenotyped against R. solani and resistant and moderately resistant sources were identified from the panel of 134 germplasm pool. Landrace Nizam shait showed resistance, where as Bidar local-2, Jigguvaratiga, NavaliSali, Jaddu and Tetep exhibited moderate resistance. Population structure was analysed by genotyping the accessions using 63 genome wide Rice Microsatellite markers which divided the mapping panel into two groups. Association mapping using GLM + Q model of TASSEL indicated significant association between twenty-one marker loci on nine chromosomes with ShB resistance with phenotypic variation (R2) ranging 3.02–22.71 per cent. We identified 13 new markers to be associated with ShB resistance. The present work validates previously identified eight markers flanking different shB QTLs. None of the allele from the tested markers was unique and common among resistant and moderately resistant landraces identified in this work except allele 420 bp of RM337 and allele 310 bp of RM5556 noticed only in Tetep. Our findings predict the possible presence of unreported QTL region in marker interval of RM337 and RM5556 on chromosome 8 for ShB resistance in Tetep which invites further investigation.
Author Related Publications
Khalid Fathi AbdulMuttalib Mohammed, "DISTRIBUTION OF MATING TYPE ALLELES AND FERTILITY OF MAGNAPORTHE ORYZAE ISOLATES IN SOUTH INDIA", International Journal of Advanced Research, 2016
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Khalid Fathi AbdulMuttalib Mohammed, "Function identification and characterization of Oryza sativa ZRT and IRT-like proteins computationally for nutrition and biofortification in rice", Taylor & Francis, 2022
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Khalid Fathi AbdulMuttalib Mohammed, "CRISPR/Cas9‐mediated homology donor repair base editing confers glyphosate resistance to rice (Oryza sativa L.)", Frontiers, 2023
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Khalid Fathi AbdulMuttalib Mohammed, "?Two decades of omics in bacterial wilt resistance in Solanaceae, What we learned", Science Direct, 2022
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Khalid Fathi AbdulMuttalib Mohammed, "De novo genome assembly of rice bean (Vigna umbellata) – A nominated nutritionally rich future crop reveals novel insights into flowering potential, habit, and palatability centric – traits for efficient domestication", Frontiers, 2022
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Department Related Publications
Ahmed Salaheldeen Mohamed Abdelrahman Eldomyaty, "IDENTIFICATION OF MOLECULAR MARKERS FOR SALT AND DROUGHT TOLERANCE USING BULKED SEGREGANT ANALYSIS (BSA) IN BREAD WHEAT (Triticum aestivum L.)", Zagazig Journal of Agricultural Research, 2014
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Abdallah Abdelaziem Hassanin Safan, "Purification and Modes of Antifungal Actionby Vicia faba cv. Egypt Trypsin Inhibitor", School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong, China., 2010
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Abdallah Abdelaziem Hassanin Safan, "Isolation of a New Trypsin Inhibitor from the Faba Bean (Vicia faba cv.Giza 843) with Potential Medicinal Applications", School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong, China., 2011
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Abdallah Abdelaziem Hassanin Safan, "Assessment of the R2R3 MYB gene expression profile during tomato fruit development using in silico analysis, quantitative and semi-quantitative RT-PCR", Elsevier, 2022
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Abdallah Abdelaziem Hassanin Safan, "Genetic and Morphological Diversity Assessment of Five Kalanchoe Genotypes by SCoT, ISSR and RAPD-PCR Markers", MDPI, 2022
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