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2-Hydroxyimino-6-aza-pyrimidine nucleosides: synthesis, DFT calculations, and antiviral evaluations†
Faculty
Science
Year:
2020
Type of Publication:
ZU Hosted
Pages:
Authors:
Riham AbdelAzeem Ibrahim
Staff Zu Site
Abstract In Staff Site
Journal:
New Journal of Chemistry United Kingdom
Volume:
Keywords :
2-Hydroxyimino-6-aza-pyrimidine nucleosides: synthesis, , calculations, , antiviral evaluations†
Abstract:
The global public health concerns and economic impact caused by emerging outbreaks of RNA viruses call for the search for new direct acting antiviral agents. Herein, we describe the synthesis, DFT calculations, and antiviral evaluation of a series of novel 2-hydroxyimino-6-aza-pyrimidine ribonucleosides. DFT//B3LYP/ 6-311+G** calculations of the tautomeric distributions of the 2-hydroxyimino nucleosides 7, 8, and 9 aqueous environments indicate a predominance of the canonical 2-(E)-hydroxyimino structure, where the hydroxyl group points away from the sugar moiety. The conformer distributions of the latte geometrical isomers of 7, 8, and 9 support the formation of five membered rings via hydrogen bonding between the (E)-C2QN–O–H moiety and N3–H of 7 and 8 and between (E)-C2QN–O–H and N3 of 9, creating purine shaped nucleosides with the glycosidic linkage at the pyrimidine ring. The newly synthesized nucleosides were screened against an RNA viral panel, of which moderate antiviral activity was observed against Zika virus (ZIKV) and human respiratory syncytial virus (HRSV). 6-Aza-2-hydroxyimino- 5-methyluridine derivative 18 showed activity against ZIKV (EC50 3.2 mM), while its peracetylated derivative 19 showed activity against HRSV (EC50 5.2 mM). The corresponding 4-thiono-2-hydroxyimino derivative 8 showed activity against HRSV (EC50 6.1 mM) and against ZIKA (EC50 2.4 mM). This study shows that the 6-aza-2-hydroxyimino-5-methyluracil derived nucleosides can be further optimized to provide potent antiviral agents.
Author Related Publications
Riham AbdelAzeem Ibrahim, "6-Methylpurine Derived Sugar Modified Nucleosides: Synthesis and Evaluation of their Substrate Activity with Purine Nucleoside Phosphorylases", Elsevier, 2016
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Riham AbdelAzeem Ibrahim, "6-Methylpurine Derived Sugar Modified Nucleosides: Synthesis and Evaluation of their Substrate Activity with Purine Nucleoside Phosphorylases", Elsevier, 2016
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Riham AbdelAzeem Ibrahim, "Lithium Hexamethyldisilazane Transformation of Transiently Protected 4‑Aza/Benzimidazole Nitriles to Amidines and their Dimethyl Sulfoxide Mediated Imidazole Ring Formation", American Chemical Society, USA, 2016
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Riham AbdelAzeem Ibrahim, "6-Methylpurine derived sugar modified nucleosides: Synthesis and in vivo antitumor activity in D54 tumor expressing M64V-Escherichia coli purine nucleoside phosphorylase", Elsevier Masson SAS., 2016
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Riham AbdelAzeem Ibrahim, "Design, synthesis, and evaluation of 4′‐phosphonomethoxy pyrimidine ribonucleosides as potential anti‐influenza agents", Germany, 2023
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Department Related Publications
Abd El Shafey Ibrahim Ahmed Ibrahim, "Halamine polymers: 1. Preparation and characterization of new pyrimidinone biocidal polymers based on poly-4-vinylacetophenone", emerald, 2004
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