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Phylogenetic Analysis of Infectious Bronchitis Viruses Currently Circulating in the Egyptian Field
Faculty
Veterinary Medicine
Year:
2019
Type of Publication:
ZU Hosted
Pages:
Authors:
Naglaa Fathy Said Awad
Staff Zu Site
Abstract In Staff Site
Journal:
Comp Biochem Physiol C Toxicol Pharmacol Faculty of Veterinary Medicine, Zagazig University
Volume:
Keywords :
Phylogenetic Analysis , Infectious Bronchitis Viruses Currently
Abstract:
One of the major problems of infectious bronchitis virus (IBV) is the frequent emergence of new variants in the Egyptian field. In the present study 42 broiler chicken flocks suffered from respiratory troubles were investigated for infectious bronchitis virus in 10 governorates in Egypt during 2016-2018. Ten out of 42 examined flocks revealed variable degrees of embryo lesions after 3-5 passages with negative heamagglutination (HA) activity. From these 10 flocks, IBV was confirmed in six flocks using reverse transcriptase polymerase chain reaction (RT-PCR) assay. Four IBV-positive isolates were selected for further sequence analysis. Partial sequencing of S1 gene revealed four IBV variant-2 isolates circulating among chickens in Egypt. These isolates are IB-Beh-Ch-F2-2016, IB-Sh-Ch-F25-2017, IB-Sh-Ch-F41-2018 and IB-Sh-Ch-F42-2018 and submitted on Gen Bank with accession numbers MH460643, MH460644, MK408615 and MK408616, respectively. The IB-Sh-Ch-F25-2017 isolate had only one amino acid substitution while IB-Beh-Ch-F2-2016, IB-Sh-Ch-F41-2018 and IB-Sh-Ch-F42-2018 isolates had much higher genetic diversity. The similarity between classic viruses of vaccine origin used in Egypt (H120, Ma5) and our four filed isolates ranged between 75.7 and 80.4%. It could be concluded that IB variant-2 strains still circulate in the Egyptian field in spite of vaccination. Therefore we need to revise the IBV vaccines used in Egypt and try to prepare local vaccines with periodic evaluation of cross protection of such vaccines.
Author Related Publications
Naglaa Fathy Said Awad, "In vitro evaluation of various antimicrobials against field mycoplasma gallisepticum and mycoplasma synoviae isolates in Egypt", Oxford University Press, 2019
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Naglaa Fathy Said Awad, "Genetic characterization of rabbit hemorrhagic disease virus from naturallyinfected rabbits in Sharkia governorate, Egypt", Egyptian Society of Virology, 2018
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Naglaa Fathy Said Awad, "Coexistence of Virulence and Antibiotic Resistance Genes in Pasteurella multocida Isolated from Diseased Rabbits", Faculty of Veterinary Medicine, Zagazig University, 2019
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Naglaa Fathy Said Awad, "Molecular Diagnosis of Persistently Very Virulent Infectious Bursal Disease Virus at Sharkia Governorate, Egypt", C M B Association, 2019
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Naglaa Fathy Said Awad, "Impact of single and mixed infections with Escherichia coli and Mycoplasma gallisepticum on Newcastle disease virus vaccine performance in broiler chickens: an in vivo perspective", Wiley-Blackwell on behalf of the Society for Applied Microbiology, 2019
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Department Related Publications
Hala Mohamed Nabil Tolba, "Risk factors associated with Chlamydia psittaci infections in psittacine birds and bird handlers", Wiley, 2018
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Hala Mohamed Nabil Tolba, "Molecular identification of avian influenza virus subtypes H5N1 and H9N2 in birds from farms and live bird markets and in respiratory patients", Peer journal, 2018
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Hala Mohamed Nabil Tolba, "Seroprevalence and risk factors associated with Toxoplasma gondii infection in domestic rabbits and humans", ELSEVIER, 2017
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Hala Mohamed Nabil Tolba, "Molecular Diagnosis of Persistently Very Virulent Infectious Bursal Disease Virus at Sharkia Governorate, Egypt", Links Research, 2019
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Hala Mohamed Nabil Tolba, "EFFECT OF THE MEDICINAL PLANT (AZADIRACHTA INDICA) ON Chlamydophila psittaci INFECTION IN BROILER CHICKENS", UNIV LJUBLJANA, VETERINARY FACULTY, GERBICEVA 60, LJUBLJANA, SLOVENIA, 1000, 2018
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