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Cluster-Distribute-Align-Merge: A General Algorithm to Speed Up Multiple Sequence Alignment on Multi-Core Computers
Faculty
Computer Science
Year:
2014
Type of Publication:
ZU Hosted
Pages:
Authors:
Ahmed Salah Mohamed Mostafa
Staff Zu Site
Abstract In Staff Site
Journal:
Journal of Computational and Theoretical Nanoscience Journal of Computational and Theoretical Nanoscience
Volume:
11
Keywords :
Cluster-Distribute-Align-Merge: , General Algorithm , Speed , Multiple Sequence
Abstract:
We present a general algorithm to speed up multiple sequence alignment on modern multi-core computers. This algorithm is implemented in a software called CDAM. By clustering, CDAM partitions a large-scale alignment problem into smaller and
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